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ImportError: libatlas.so.3: cannot open shared object file: No such file or directory

After installing Scipy, when I import optimize from Scipy, the following error occurs. 

Traceback (most recent call last):
  File "", line 1, in
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/__init__.py", line 130, in
    import add_newdocs
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in
    from lib import add_newdoc
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in
    from polynomial import *
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 18, in
    from numpy.linalg import eigvals, lstsq
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 47, in
    from linalg import *
  File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 22, in
    from numpy.linalg import lapack_lite
ImportError: libatlas.so.3: cannot open shared object file: No such file or directory

Solution of this problem: 

add the paths to LD_LIBRARY_PATH as advised (see below), then "python setup.py clean;python setup.py build;python setup.py install;"  but the same error persists.

export LAPACK=/usr/lib/lapack/liblapack.so;export ATLAS=/usr/lib/atlas-base/libatlas.so;
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib/lapack:/usr/lib/atlas-base;


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Rubyrise said...

The "ImportError: libatlas.so.3: cannot open shared object file" error usually indicates a missing shared library file required by a program. To troubleshoot this issue, check dependencies, reinstall the library that provides libatlas.so.3, check the library path, create a symbolic link to point to the existing library file, and recompile if building from source. Address any missing dependencies or incorrect configurations to resolve the ImportError related to libatlas.so.3 manassas criminal lawyer.

Tom Hartley said...

An ImportError related to libatlas.so.3 is a common issue where a Python package that relies on numerical computations, such as NumPy or SciPy, cannot find the necessary shared library file. To resolve this issue, try reinstalling the package using pip or your package manager. Check the dependencies and ensure all required packages are installed correctly. If using a package manager like apt or yum, install libatlas-base-dev or similar packages. If working within a virtual environment, consider recreating the virtual environment and reinstalling the necessary packages. Update libraries and ensure all relevant libraries and packages are up to date to avoid compatibility issues. Check the PATH environment variable to ensure the directory containing libatlas.so.3 is included in your system's PATH environment variable. If these solutions don't resolve the issue, provide more details about your environment, including your operating system, Python version, and relevant package versions.reckless driving virginia penalty

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