After installing Scipy, when I import optimize from Scipy, the following error occurs.
Traceback (most recent call last):
File "", line 1, in
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/__init__.py", line 130, in
import add_newdocs
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/add_newdocs.py", line 9, in
from lib import add_newdoc
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/lib/__init__.py", line 13, in
from polynomial import *
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/lib/polynomial.py", line 18, in
from numpy.linalg import eigvals, lstsq
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/linalg/__init__.py", line 47, in
from linalg import *
File "/home/allank/SmashCell/local/lib/python2.7/site-packages/numpy/linalg/linalg.py", line 22, in
from numpy.linalg import lapack_lite
ImportError: libatlas.so.3: cannot open shared object file: No such file or directory
add the paths to LD_LIBRARY_PATH as advised (see below), then "python setup.py clean;python setup.py build;python setup.py install;" but the same error persists.
export LAPACK=/usr/lib/lapack/liblapack.so;export ATLAS=/usr/lib/atlas-base/libatlas.so;
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib/lapack:/usr/lib/atlas-base;
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