Sent to you by jeffye via Google Reader:
via natural language processing blog by hal on 3/2/09My colleague Suresh Venkatasubramanian is running as seminar on clustering this semester. Last week we discussed EM and mixture of Gaussians. I almost skipped because it's a relatively old hat topic for me (how many times have I given this lecture?!), and had some grant stuff going out that day. But I decided to show up anyway. I'm glad I did.
We discussed a lot of interesting things, but something that had been bugging me for a while finally materialized in a way about which I can be precise. I basically have two (purely qualitative) issues with mixture of Gaussians as a clustering method. (No, I'm not actually suggesting there's anything wrong with using it in practice.) My first complaint is that many times, MoG is used to get the cluster assignments, or to get soft-cluster assignments... but this has always struck me as a bit weird because then we should be maximizing over the cluster assignments and doing expectations over everything else. Max Welling has done some work related to this in the Bayesian setting. (I vaguely remember that someone else did basically the same thing at basically the same time, but can't remember any more who it was.)
But my more fundamental question is this. When we start dealing with MoG, we usually say something like... suppose we have a density F which can be represented at F = pi_0 F_0 + pi_1 F_1 + ... + pi_K F_K, where the pis give a convex combination of "simpler" densities F_k. This question arose in the context of density estimation (if my history is correct) and the maximum likelihood solution via expectation maximization was developed to solve the density estimation problem. That is, the ORIGINAL goal in this case was to do density estimation; the fact that "cluster assignments" were produced as a byproduct was perhaps not the original intent.
I can actually give a fairly simple example to try to make this point visually. Here is some data generated by a mixture of uniform distributions. And I'll even tell you that K=2 in this case. There are 20,000 points if I recall correctly:
Can you tell me what the distribution is? Can you give me the components? Can you give me cluster assignments?
The problem is that I've constructed this to be non-identifiable. Here are two ways of writing down the components. (I've drawn this in 2D, but only pay attention to the x dimension.) They give rise to exactly the same distribution. One is equally weighted components, one uniform on the range (-3,1) and one uniform on the range (-1,3). The other is to have to components, one with 2/3 weight on the range (-3,3) and one with 1/3 weight on the range (-1,1).
I could imagine some sort of maximum likelihood parameter estimation giving rise to either of these (EM is hard to get to work here because once a point is outside the bounds of a uniform, it has probability zero). They both correctly recover the distribution, but would give rise to totally different (and sort of weird) cluster assignments.
I want to quickly point out that this is a very different issue from the standard "non-identifiability in mixture models issue" that has to do with the fact that any permutation of cluster indices gives rise to the same model.
So I guess that all this falls under the category of "if you want X, go for X." If you want a clustering, go for a clustering -- don't go for density estimation and try to read off clusters as a by-product. (Of course, I don't entirely believe this, but I still think it's worth thinking about.)